dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002215_3|CGC1
Gene ID: MGYG000002215_00137
Location and strand information: 17270 - 18157 (+)
Family: 3.A.1.1.18
Protein type: TC
Protein description: sn-glycerol-3-phosphate transport system permease protein UgpA

Gene clsuter ID: MGYG000002215_3|CGC1
Gene ID: MGYG000002215_00138
Location and strand information: 18168 - 18995 (+)
Family: 3.A.1.1.18
Protein type: TC
Protein description: Trehalose transport system permease protein SugB

Gene clsuter ID: MGYG000002215_3|CGC1
Gene ID: MGYG000002215_00139
Location and strand information: 19013 - 20029 (+)
Family: GH130|GH0
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8633
Protein molecular weight: 40048.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002215_3|CGC1
Gene ID: MGYG000002215_00140
Location and strand information: 20047 - 21804 (+)
Family: dCache_1+HATPase_c
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002215_3|CGC1
Gene ID: MGYG000002215_00141
Location and strand information: 21779 - 22618 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: putative response regulatory protein

Gene clsuter ID: MGYG000002215_3|CGC1
Gene ID: MGYG000002215_00142
Location and strand information: 22624 - 24576 (+)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 6.5614
Protein molecular weight: 74356.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002215_3|CGC1
Gene ID: MGYG000002215_00143
Location and strand information: 24736 - 25623 (+)
Family: null
Protein type: null
Protein description: putative protein YpuA

Gene clsuter ID: MGYG000002215_3|CGC1
Gene ID: MGYG000002215_00144
Location and strand information: 25749 - 26426 (-)
Family: null
Protein type: null
Protein description: GTP pyrophosphokinase YwaC

Gene clsuter ID: MGYG000002215_3|CGC1
Gene ID: MGYG000002215_00145
Location and strand information: 26578 - 27636 (-)
Family: 9.A.23.1.1
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002215_00137	sn-glycerol-3-phosphate transport system permease protein UgpA	TC	17270	18157	+	3.A.1.1.18
MGYG000002215_00138	Trehalose transport system permease protein SugB	TC	18168	18995	+	3.A.1.1.18
MGYG000002215_00139	hypothetical protein	CAZyme	19013	20029	+	GH130\| GH0
MGYG000002215_00140	hypothetical protein	STP	20047	21804	+	dCache_1\| HATPase_c
MGYG000002215_00141	putative response regulatory protein	TF	21779	22618	+	HTH_AraC+HTH_AraC
MGYG000002215_00142	Non-reducing end beta-L-arabinofuranosidase	CAZyme	22624	24576	+	GH127
MGYG000002215_00143	putative protein YpuA	null	24736	25623	+	DUF1002
MGYG000002215_00144	GTP pyrophosphokinase YwaC	null	25749	26426	-	RelA_SpoT
MGYG000002215_00145	hypothetical protein	TC	26578	27636	-	9.A.23.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature